Publications

• CBSGI policy is to accelerate research by making pre-prints of all manuscripts publicly available.

• CBSGI authors denoted in bold

Dynamics of airway microbiota identify a critical window for interplay of pathogenic bacteria and allergic sensitization in childhood respiratory disease
Teo SM, Tang HHF, Mok D, Judd LM, Watts SC, Pham K, Holt BJ, Kusel M, Serralha M, Troy N, Bochkov YA, Grindle K, Lemanske RM, Johnston SL, Gern JE, Sly PD, Holt PG, Holt KE*, Inouye M*
Cell Host & Microbe 2018. in press.    pre-print

Frequent transmission of the Mycobacterium tuberculosis Beijing lineage and positive selection for the EsxW Beijing variant in Vietnam
Holt KE, McAdam P, Phan VKT, Nguyen TTT, Dang TMH, Nguyen NL, Nguyen HL, Nguyen TQN, Hoang TH, Vu TNH, Thwaites G, Edwards DJ, Nath AP, Pham K, Ascher DB, Farrar JJ, Khor CC, Teo YY, Inouye M, Caws M, Dunstan SJ.
Nature Genetics 2018. 50:849–856.    pre-print

Pre-prints on BioRxiv:

The landscape of incident disease risk for the biomarker GlycA and its mortality stratification in angiography patients
Kettunen J*, Ritchie SC*, Anufrieva O, Lyytikainen LP, Hernesniemi J, Karhunen PJ, Kuukasjarvi P, Laurikka J, Kahonen M, Lehtimaki T, Havulinna A, Salomaa V, Mannisto S, Ala-Korpela M, Perola M, Inouye M*, Wurtz P*
pre-print

Elevated alpha-1 antitrypsin is a major component of GlycA-associated risk for future morbidity and mortality
Ritchie SC, Kettunen J, Brozynska M, Nath AP, Havulinna, Mannisto S, Perola M, Salomaa V, Ala-Korpela M, Abraham G, Wurtz P, Inouye M
pre-print

FastSpar: Rapid and scalable correlation estimation for compositional data
Watts SC, Ritchie SC, Inouye M, Holt KE
pre-print

Genomic risk prediction of coronary artery disease in nearly 500,000 adults: implications for early screening and primary prevention
Inouye M*, Abraham G*, Nelson CP, Wood AM, Sweeting MJ, Dudbridge F, Lai FY, Kaptoge S, Brozynska M, Wang T, Ye S, Webb TR, Rutter MK, Tzoulaki I, Patel RS, Loos RJF, Keavney B, Hemingway H, Thompson J, Watkins H, Deloukas P, Di Angelantonio E, Butterworth AS, Danesh J, Samani NJ* for The UK Biobank CardioMetabolic Consortium CHD Working Group
pre-print

Non-parametric mixture models identify trajectories of childhood immune development relevant to asthma and allergy
Tang HHF, Teo SM, Belgrave DCM, Evans MD, Jackson DJ, Brozynska M, Kusel MMH, Johnston SL, Gern JE, Lemanske RF, Simpson A, Custovic A, Sly PD, Holt PG, Holt KE, Inouye M
pre-print

Power, false discovery rate and Winner’s Curse in eQTL studies
Huang QQ, Ritchie SC, Brozynska M, Inouye M.
pre-print